The Normal Prion Protein
and
The Prion Gene


Electron micrograph of prion protein.



 

   In its normal, non-infectious state, the prion protein (PrP) is a hydrophobic glycoprotein that is "soluble in the presence of significant quantities of non-polar water miscible solvents".  Spectroscopic data and computer simulations by Cohen et al have indicated a compact bundle with four alpha-helices at the core and complex oligosaccharides linked to protein.  PrP is highly conserved across many species, including humans, sheep, mice, hamsters, Drosophila and bovine, suggesting an important function in neurons.  It occurs as a GPI-anchored protein on the surfaces of neurons and is a widely expressed product of normal cellular function.  Although it is suspected that the prion protein is involved in synaptic activity, its function is not yet known.  In mice, excessive amounts of normal (non-infectious) PrP can lead to neurodegeneration and destruction of both muscles and peripheral nerves.

    In humans, the gene which codes for the prion protein has been traced to the short arm of chromosome 20 (specifically, 20p12-pter).  Within the 20p12-pter region, Schnittger et al (1992) have demonstrated the loci to be:  pter-PrP-SCG1 (118920-BMP2A(112261)- PAX1(167411)-cen.  The entire PrP gene has been  sequenced and determined to consist of two exons and a single intron with one major transcriptional start site.  Further, the region immediately 5' of the transcriptional initiation site in human PrP genes contains many GC repeats, a characteristic common in housekeeping genes.  Also 5' of the PrP gene is a RFLP (Restriction Fragment Length Polymorphisms) that has a high degree of heterozygosity and serves as a marker for the pter-p12 region of chromosome 20.  Current research indicates that there are 13 known alleles for the human prion gene based on point mutations and substitutions.

     In sheeps, there are 8 known alleles for the prion protein.  each allele is a result of a point mutation within the gene, with allele frequencies varying between breeds and flocks.  While most of the alleles have been found in healthy sheep, the PrPMARH allele is associated with a high incidence of scrapie.  Sequencing of sheep PrP coding sequence indicates homologous regions between sheep and human genes.  As in humans, very little is known about the function of the normal prion protein in sheep neurons.

     In bovine, the PrP gene alleles vary in the number of GC elements (either 5 or 6) which code forthe octapeptide (oligosaccharide) Pro-His-Gly-Gly-Gly-Trp-Gly-Glu, or its longer variants Pro-Glu/His-Gly-Gly-Gly-Gly-Trp-Gly-Glu, creating polymorphism.  Further, a silent Hindll restriction site polymorphism occurs in the bovine PrP gene with no known affect on function.  The protein is normally found in skelatal muscle (steak) and lymphocytes in milk (along with neural membranes).  Similarly to sheep and humans, very little is known about the normal protein's functions in cows.


  to Characteristics of Prion
to John's Genomic Project
 
Links to Other Prion Page